Index
Table Of Contents
- 1. Introduction
- 2. The OpenMM Application Layer: Introduction
- 3. Installing OpenMM
- 4. Running Simulations
- 5. Model Building and Editing
- 6. Advanced Simulation Examples
- 7. Creating Force Fields
- 8. The OpenMM Library: Introduction
- 9. Compiling OpenMM from Source Code
- 10. OpenMM Tutorials
- 11. Platform-Specific Properties
- 12. Using OpenMM with Software Written in Languages Other than C++
- 13. Examples of OpenMM Integration
- 14. Testing and Validation of OpenMM
- 15. AMOEBA Plugin
- 16. Ring Polymer Molecular Dynamics (RPMD) Plugin
- 17. Drude Plugin
- 18. The Theory Behind OpenMM: Introduction
- 19. Standard Forces
- 20. Custom Forces
- 21. Integrators
- 22. Other Features
- 23. Bibliography
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