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State.h
1 #ifndef OPENMM_STATE_H_
2 #define OPENMM_STATE_H_
3 
4 /* -------------------------------------------------------------------------- *
5  * OpenMM *
6  * -------------------------------------------------------------------------- *
7  * This is part of the OpenMM molecular simulation toolkit originating from *
8  * Simbios, the NIH National Center for Physics-Based Simulation of *
9  * Biological Structures at Stanford, funded under the NIH Roadmap for *
10  * Medical Research, grant U54 GM072970. See https://simtk.org. *
11  * *
12  * Portions copyright (c) 2008 Stanford University and the Authors. *
13  * Authors: Peter Eastman *
14  * Contributors: *
15  * *
16  * Permission is hereby granted, free of charge, to any person obtaining a *
17  * copy of this software and associated documentation files (the "Software"), *
18  * to deal in the Software without restriction, including without limitation *
19  * the rights to use, copy, modify, merge, publish, distribute, sublicense, *
20  * and/or sell copies of the Software, and to permit persons to whom the *
21  * Software is furnished to do so, subject to the following conditions: *
22  * *
23  * The above copyright notice and this permission notice shall be included in *
24  * all copies or substantial portions of the Software. *
25  * *
26  * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR *
27  * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, *
28  * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL *
29  * THE AUTHORS, CONTRIBUTORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, *
30  * DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR *
31  * OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE *
32  * USE OR OTHER DEALINGS IN THE SOFTWARE. *
33  * -------------------------------------------------------------------------- */
34 
35 #include "Vec3.h"
36 #include <map>
37 #include <string>
38 #include <vector>
39 #include "internal/windowsExport.h"
40 
41 namespace OpenMM {
42 
54 class OPENMM_EXPORT State {
55 public:
56  class StateBuilder;
61  enum DataType {Positions=1, Velocities=2, Forces=4, Energy=8, Parameters=16};
65  State();
69  double getTime() const;
73  const std::vector<Vec3>& getPositions() const;
77  const std::vector<Vec3>& getVelocities() const;
81  const std::vector<Vec3>& getForces() const;
90  double getKineticEnergy() const;
94  double getPotentialEnergy() const;
102  void getPeriodicBoxVectors(Vec3& a, Vec3& b, Vec3& c) const;
106  double getPeriodicBoxVolume() const;
110  const std::map<std::string, double>& getParameters() const;
114  int getDataTypes() const;
115 private:
116  State(double time);
117  void setPositions(const std::vector<Vec3>& pos);
118  void setVelocities(const std::vector<Vec3>& vel);
119  void setForces(const std::vector<Vec3>& force);
120  void setParameters(const std::map<std::string, double>& params);
121  void setEnergy(double ke, double pe);
122  void setPeriodicBoxVectors(const Vec3& a, const Vec3& b, const Vec3& c);
123  int types;
124  double time, ke, pe;
125  std::vector<Vec3> positions;
126  std::vector<Vec3> velocities;
127  std::vector<Vec3> forces;
128  Vec3 periodicBoxVectors[3];
129  std::map<std::string, double> parameters;
130 };
131 
137 class OPENMM_EXPORT State::StateBuilder {
138 public:
139  StateBuilder(double time);
140  State getState();
141  void setPositions(const std::vector<Vec3>& pos);
142  void setVelocities(const std::vector<Vec3>& vel);
143  void setForces(const std::vector<Vec3>& force);
144  void setParameters(const std::map<std::string, double>& params);
145  void setEnergy(double ke, double pe);
146  void setPeriodicBoxVectors(const Vec3& a, const Vec3& b, const Vec3& c);
147 private:
148  State state;
149 };
150 
151 } // namespace OpenMM
152 
153 #endif /*OPENMM_STATE_H_*/
A State object records a snapshot of the current state of a simulation at a point in time...
Definition: State.h:54
This class represents a three component vector.
Definition: Vec3.h:45
DataType
This is an enumeration of the types of data which may be stored in a State.
Definition: State.h:61
Definition: AndersenThermostat.h:40