.. _library :

Library Layer
=============


Core Objects
~~~~~~~~~~~~
.. autosummary::
    :toctree: generated/
    :template: class.rst
    :nosignatures:

    ~simtk.openmm.openmm.System
    ~simtk.openmm.openmm.Context
    ~simtk.openmm.openmm.Platform
    ~simtk.openmm.openmm.State


Forces
~~~~~~
.. autosummary::
    :toctree: generated/
    :template: class.rst
    :nosignatures:

    
    ~simtk.openmm.openmm.AmoebaAngleForce
    
    ~simtk.openmm.openmm.AmoebaBondForce
    
    ~simtk.openmm.openmm.AmoebaGeneralizedKirkwoodForce
    
    ~simtk.openmm.openmm.AmoebaInPlaneAngleForce
    
    ~simtk.openmm.openmm.AmoebaMultipoleForce
    
    ~simtk.openmm.openmm.AmoebaOutOfPlaneBendForce
    
    ~simtk.openmm.openmm.AmoebaPiTorsionForce
    
    ~simtk.openmm.openmm.AmoebaStretchBendForce
    
    ~simtk.openmm.openmm.AmoebaTorsionTorsionForce
    
    ~simtk.openmm.openmm.AmoebaVdwForce
    
    ~simtk.openmm.openmm.AmoebaWcaDispersionForce
    
    ~simtk.openmm.openmm.AndersenThermostat
    
    ~simtk.openmm.openmm.CMAPTorsionForce
    
    ~simtk.openmm.openmm.CMMotionRemover
    
    ~simtk.openmm.openmm.CustomAngleForce
    
    ~simtk.openmm.openmm.CustomBondForce
    
    ~simtk.openmm.openmm.CustomCentroidBondForce
    
    ~simtk.openmm.openmm.CustomCompoundBondForce
    
    ~simtk.openmm.openmm.CustomExternalForce
    
    ~simtk.openmm.openmm.CustomGBForce
    
    ~simtk.openmm.openmm.CustomHbondForce
    
    ~simtk.openmm.openmm.CustomManyParticleForce
    
    ~simtk.openmm.openmm.CustomNonbondedForce
    
    ~simtk.openmm.openmm.CustomTorsionForce
    
    ~simtk.openmm.openmm.DrudeForce
    
    ~simtk.openmm.openmm.Force
    
    ~simtk.openmm.openmm.GBSAOBCForce
    
    ~simtk.openmm.openmm.GayBerneForce
    
    ~simtk.openmm.openmm.HarmonicAngleForce
    
    ~simtk.openmm.openmm.HarmonicBondForce
    
    ~simtk.openmm.openmm.MonteCarloAnisotropicBarostat
    
    ~simtk.openmm.openmm.MonteCarloBarostat
    
    ~simtk.openmm.openmm.MonteCarloMembraneBarostat
    
    ~simtk.openmm.openmm.NonbondedForce
    
    ~simtk.openmm.openmm.PeriodicTorsionForce
    
    ~simtk.openmm.openmm.RBTorsionForce
    
    ~simtk.openmm.openmm.RPMDMonteCarloBarostat
    


Integrators
~~~~~~~~~~~
.. autosummary::
    :toctree: generated/
    :template: class.rst
    :nosignatures:

    
    ~simtk.openmm.amd.AMDForceGroupIntegrator
    
    ~simtk.openmm.amd.AMDIntegrator
    
    ~simtk.openmm.openmm.BrownianIntegrator
    
    ~simtk.openmm.openmm.CompoundIntegrator
    
    ~simtk.openmm.openmm.CustomIntegrator
    
    ~simtk.openmm.openmm.DrudeLangevinIntegrator
    
    ~simtk.openmm.openmm.DrudeSCFIntegrator
    
    ~simtk.openmm.amd.DualAMDIntegrator
    
    ~simtk.openmm.openmm.Integrator
    
    ~simtk.openmm.openmm.LangevinIntegrator
    
    ~simtk.openmm.mtsintegrator.MTSIntegrator
    
    ~simtk.openmm.openmm.RPMDIntegrator
    
    ~simtk.openmm.openmm.VariableLangevinIntegrator
    
    ~simtk.openmm.openmm.VariableVerletIntegrator
    
    ~simtk.openmm.openmm.VerletIntegrator
    

Extras
~~~~~~
.. autosummary::
    :toctree: generated/
    :template: class.rst
    :nosignatures:

    
    ~simtk.openmm.openmm.Continuous1DFunction
    
    ~simtk.openmm.openmm.Continuous2DFunction
    
    ~simtk.openmm.openmm.Continuous3DFunction
    
    ~simtk.openmm.openmm.Discrete1DFunction
    
    ~simtk.openmm.openmm.Discrete2DFunction
    
    ~simtk.openmm.openmm.Discrete3DFunction
    
    ~simtk.openmm.openmm.LocalCoordinatesSite
    
    ~simtk.openmm.openmm.LocalEnergyMinimizer
    
    ~simtk.openmm.openmm.OutOfPlaneSite
    
    ~simtk.openmm.openmm.SerializationNode
    
    ~simtk.openmm.openmm.SerializationProxy
    
    ~simtk.openmm.openmm.TabulatedFunction
    
    ~simtk.openmm.openmm.ThreeParticleAverageSite
    
    ~simtk.openmm.openmm.TwoParticleAverageSite
    
    ~simtk.openmm.vec3.Vec3
    
    ~simtk.openmm.openmm.VirtualSite
    
    ~simtk.openmm.openmm.XmlSerializer