Residue¶
- class openmm.app.topology.Residue(name, index, chain, id, insertionCode)¶
A Residue object represents a residue within a Topology.
- __init__(name, index, chain, id, insertionCode)¶
Construct a new Residue. You should call addResidue() on the Topology instead of calling this directly.
Methods
__init__
(name, index, chain, id, insertionCode)Construct a new Residue.
atoms
()Iterate over all Atoms in the Residue.
bonds
()Iterate over all Bonds involving any atom in this residue.
Iterate over all Bonds to external atoms.
Iterate over all internal Bonds.
- atoms()¶
Iterate over all Atoms in the Residue.
- bonds()¶
Iterate over all Bonds involving any atom in this residue.
- internal_bonds()¶
Iterate over all internal Bonds.
- external_bonds()¶
Iterate over all Bonds to external atoms.