| addAcceptor(int a1, int a2, int a3, const std::vector< double > ¶meters) | CustomHbondForce | |
| addDonor(int d1, int d2, int d3, const std::vector< double > ¶meters) | CustomHbondForce | |
| addExclusion(int donor, int acceptor) | CustomHbondForce | |
| addFunction(const std::string &name, const std::vector< double > &values, double min, double max) | CustomHbondForce | |
| addGlobalParameter(const std::string &name, double defaultValue) | CustomHbondForce | |
| addPerAcceptorParameter(const std::string &name) | CustomHbondForce | |
| addPerDonorParameter(const std::string &name) | CustomHbondForce | |
| addTabulatedFunction(const std::string &name, TabulatedFunction *function) | CustomHbondForce | |
| createImpl() const | CustomHbondForce | protectedvirtual |
| CustomHbondForce(const std::string &energy) | CustomHbondForce | explicit |
| CutoffNonPeriodic enum value | CustomHbondForce | |
| CutoffPeriodic enum value | CustomHbondForce | |
| Force() | Force | inline |
| getAcceptorParameters(int index, int &a1, int &a2, int &a3, std::vector< double > ¶meters) const | CustomHbondForce | |
| getContextImpl(Context &context) | Force | protected |
| getCutoffDistance() const | CustomHbondForce | |
| getDonorParameters(int index, int &d1, int &d2, int &d3, std::vector< double > ¶meters) const | CustomHbondForce | |
| getEnergyFunction() const | CustomHbondForce | |
| getExclusionParticles(int index, int &donor, int &acceptor) const | CustomHbondForce | |
| getForceGroup() const | Force | |
| getFunctionParameters(int index, std::string &name, std::vector< double > &values, double &min, double &max) const | CustomHbondForce | |
| getGlobalParameterDefaultValue(int index) const | CustomHbondForce | |
| getGlobalParameterName(int index) const | CustomHbondForce | |
| getImplInContext(Context &context) | Force | protected |
| getNonbondedMethod() const | CustomHbondForce | |
| getNumAcceptors() const | CustomHbondForce | inline |
| getNumDonors() const | CustomHbondForce | inline |
| getNumExclusions() const | CustomHbondForce | inline |
| getNumFunctions() const | CustomHbondForce | inline |
| getNumGlobalParameters() const | CustomHbondForce | inline |
| getNumPerAcceptorParameters() const | CustomHbondForce | inline |
| getNumPerDonorParameters() const | CustomHbondForce | inline |
| getNumTabulatedFunctions() const | CustomHbondForce | inline |
| getPerAcceptorParameterName(int index) const | CustomHbondForce | |
| getPerDonorParameterName(int index) const | CustomHbondForce | |
| getTabulatedFunction(int index) const | CustomHbondForce | |
| getTabulatedFunction(int index) | CustomHbondForce | |
| getTabulatedFunctionName(int index) const | CustomHbondForce | |
| NoCutoff enum value | CustomHbondForce | |
| NonbondedMethod enum name | CustomHbondForce | |
| setAcceptorParameters(int index, int a1, int a2, int a3, const std::vector< double > ¶meters) | CustomHbondForce | |
| setCutoffDistance(double distance) | CustomHbondForce | |
| setDonorParameters(int index, int d1, int d2, int d3, const std::vector< double > ¶meters) | CustomHbondForce | |
| setEnergyFunction(const std::string &energy) | CustomHbondForce | |
| setExclusionParticles(int index, int donor, int acceptor) | CustomHbondForce | |
| setForceGroup(int group) | Force | |
| setFunctionParameters(int index, const std::string &name, const std::vector< double > &values, double min, double max) | CustomHbondForce | |
| setGlobalParameterDefaultValue(int index, double defaultValue) | CustomHbondForce | |
| setGlobalParameterName(int index, const std::string &name) | CustomHbondForce | |
| setNonbondedMethod(NonbondedMethod method) | CustomHbondForce | |
| setPerAcceptorParameterName(int index, const std::string &name) | CustomHbondForce | |
| setPerDonorParameterName(int index, const std::string &name) | CustomHbondForce | |
| updateParametersInContext(Context &context) | CustomHbondForce | |
| usesPeriodicBoundaryConditions() const | CustomHbondForce | inlinevirtual |
| ~CustomHbondForce() | CustomHbondForce | |
| ~Force() | Force | inlinevirtual |