| addExclusion(int particle1, int particle2) | CustomManyParticleForce | |
| addGlobalParameter(const std::string &name, double defaultValue) | CustomManyParticleForce | |
| addParticle(const std::vector< double > ¶meters, int type=0) | CustomManyParticleForce | |
| addPerParticleParameter(const std::string &name) | CustomManyParticleForce | |
| addTabulatedFunction(const std::string &name, TabulatedFunction *function) | CustomManyParticleForce | |
| createExclusionsFromBonds(const std::vector< std::pair< int, int > > &bonds, int bondCutoff) | CustomManyParticleForce | |
| createImpl() const | CustomManyParticleForce | protectedvirtual |
| CustomManyParticleForce(int particlesPerSet, const std::string &energy) | CustomManyParticleForce | explicit |
| CutoffNonPeriodic enum value | CustomManyParticleForce | |
| CutoffPeriodic enum value | CustomManyParticleForce | |
| Force() | Force | inline |
| getContextImpl(Context &context) | Force | protected |
| getCutoffDistance() const | CustomManyParticleForce | |
| getEnergyFunction() const | CustomManyParticleForce | |
| getExclusionParticles(int index, int &particle1, int &particle2) const | CustomManyParticleForce | |
| getForceGroup() const | Force | |
| getGlobalParameterDefaultValue(int index) const | CustomManyParticleForce | |
| getGlobalParameterName(int index) const | CustomManyParticleForce | |
| getImplInContext(Context &context) | Force | protected |
| getNonbondedMethod() const | CustomManyParticleForce | |
| getNumExclusions() const | CustomManyParticleForce | inline |
| getNumGlobalParameters() const | CustomManyParticleForce | inline |
| getNumParticles() const | CustomManyParticleForce | inline |
| getNumParticlesPerSet() const | CustomManyParticleForce | inline |
| getNumPerParticleParameters() const | CustomManyParticleForce | inline |
| getNumTabulatedFunctions() const | CustomManyParticleForce | inline |
| getParticleParameters(int index, std::vector< double > ¶meters, int &type) const | CustomManyParticleForce | |
| getPermutationMode() const | CustomManyParticleForce | |
| getPerParticleParameterName(int index) const | CustomManyParticleForce | |
| getTabulatedFunction(int index) const | CustomManyParticleForce | |
| getTabulatedFunction(int index) | CustomManyParticleForce | |
| getTabulatedFunctionName(int index) const | CustomManyParticleForce | |
| getTypeFilter(int index, std::set< int > &types) const | CustomManyParticleForce | |
| NoCutoff enum value | CustomManyParticleForce | |
| NonbondedMethod enum name | CustomManyParticleForce | |
| PermutationMode enum name | CustomManyParticleForce | |
| setCutoffDistance(double distance) | CustomManyParticleForce | |
| setEnergyFunction(const std::string &energy) | CustomManyParticleForce | |
| setExclusionParticles(int index, int particle1, int particle2) | CustomManyParticleForce | |
| setForceGroup(int group) | Force | |
| setGlobalParameterDefaultValue(int index, double defaultValue) | CustomManyParticleForce | |
| setGlobalParameterName(int index, const std::string &name) | CustomManyParticleForce | |
| setNonbondedMethod(NonbondedMethod method) | CustomManyParticleForce | |
| setParticleParameters(int index, const std::vector< double > ¶meters, int type) | CustomManyParticleForce | |
| setPermutationMode(PermutationMode mode) | CustomManyParticleForce | |
| setPerParticleParameterName(int index, const std::string &name) | CustomManyParticleForce | |
| setTypeFilter(int index, const std::set< int > &types) | CustomManyParticleForce | |
| SinglePermutation enum value | CustomManyParticleForce | |
| UniqueCentralParticle enum value | CustomManyParticleForce | |
| updateParametersInContext(Context &context) | CustomManyParticleForce | |
| usesPeriodicBoundaryConditions() const | CustomManyParticleForce | inlinevirtual |
| ~CustomManyParticleForce() | CustomManyParticleForce | |
| ~Force() | Force | inlinevirtual |