| addExclusion(int particle1, int particle2) | CustomNonbondedForce | |
| addFunction(const std::string &name, const std::vector< double > &values, double min, double max) | CustomNonbondedForce | |
| addGlobalParameter(const std::string &name, double defaultValue) | CustomNonbondedForce | |
| addInteractionGroup(const std::set< int > &set1, const std::set< int > &set2) | CustomNonbondedForce | |
| addParticle(const std::vector< double > ¶meters) | CustomNonbondedForce | |
| addPerParticleParameter(const std::string &name) | CustomNonbondedForce | |
| addTabulatedFunction(const std::string &name, TabulatedFunction *function) | CustomNonbondedForce | |
| createExclusionsFromBonds(const std::vector< std::pair< int, int > > &bonds, int bondCutoff) | CustomNonbondedForce | |
| createImpl() const | CustomNonbondedForce | protectedvirtual |
| CustomNonbondedForce(const std::string &energy) | CustomNonbondedForce | explicit |
| CustomNonbondedForce(const CustomNonbondedForce &rhs) | CustomNonbondedForce | |
| CutoffNonPeriodic enum value | CustomNonbondedForce | |
| CutoffPeriodic enum value | CustomNonbondedForce | |
| Force() | Force | inline |
| getContextImpl(Context &context) | Force | protected |
| getCutoffDistance() const | CustomNonbondedForce | |
| getEnergyFunction() const | CustomNonbondedForce | |
| getExclusionParticles(int index, int &particle1, int &particle2) const | CustomNonbondedForce | |
| getForceGroup() const | Force | |
| getFunctionParameters(int index, std::string &name, std::vector< double > &values, double &min, double &max) const | CustomNonbondedForce | |
| getGlobalParameterDefaultValue(int index) const | CustomNonbondedForce | |
| getGlobalParameterName(int index) const | CustomNonbondedForce | |
| getImplInContext(Context &context) | Force | protected |
| getInteractionGroupParameters(int index, std::set< int > &set1, std::set< int > &set2) const | CustomNonbondedForce | |
| getNonbondedMethod() const | CustomNonbondedForce | |
| getNumExclusions() const | CustomNonbondedForce | inline |
| getNumFunctions() const | CustomNonbondedForce | inline |
| getNumGlobalParameters() const | CustomNonbondedForce | inline |
| getNumInteractionGroups() const | CustomNonbondedForce | inline |
| getNumParticles() const | CustomNonbondedForce | inline |
| getNumPerParticleParameters() const | CustomNonbondedForce | inline |
| getNumTabulatedFunctions() const | CustomNonbondedForce | inline |
| getParticleParameters(int index, std::vector< double > ¶meters) const | CustomNonbondedForce | |
| getPerParticleParameterName(int index) const | CustomNonbondedForce | |
| getSwitchingDistance() const | CustomNonbondedForce | |
| getTabulatedFunction(int index) const | CustomNonbondedForce | |
| getTabulatedFunction(int index) | CustomNonbondedForce | |
| getTabulatedFunctionName(int index) const | CustomNonbondedForce | |
| getUseLongRangeCorrection() const | CustomNonbondedForce | |
| getUseSwitchingFunction() const | CustomNonbondedForce | |
| NoCutoff enum value | CustomNonbondedForce | |
| NonbondedMethod enum name | CustomNonbondedForce | |
| setCutoffDistance(double distance) | CustomNonbondedForce | |
| setEnergyFunction(const std::string &energy) | CustomNonbondedForce | |
| setExclusionParticles(int index, int particle1, int particle2) | CustomNonbondedForce | |
| setForceGroup(int group) | Force | |
| setFunctionParameters(int index, const std::string &name, const std::vector< double > &values, double min, double max) | CustomNonbondedForce | |
| setGlobalParameterDefaultValue(int index, double defaultValue) | CustomNonbondedForce | |
| setGlobalParameterName(int index, const std::string &name) | CustomNonbondedForce | |
| setInteractionGroupParameters(int index, const std::set< int > &set1, const std::set< int > &set2) | CustomNonbondedForce | |
| setNonbondedMethod(NonbondedMethod method) | CustomNonbondedForce | |
| setParticleParameters(int index, const std::vector< double > ¶meters) | CustomNonbondedForce | |
| setPerParticleParameterName(int index, const std::string &name) | CustomNonbondedForce | |
| setSwitchingDistance(double distance) | CustomNonbondedForce | |
| setUseLongRangeCorrection(bool use) | CustomNonbondedForce | |
| setUseSwitchingFunction(bool use) | CustomNonbondedForce | |
| updateParametersInContext(Context &context) | CustomNonbondedForce | |
| usesPeriodicBoundaryConditions() const | CustomNonbondedForce | inlinevirtual |
| ~CustomNonbondedForce() | CustomNonbondedForce | |
| ~Force() | Force | inlinevirtual |