- _ -
- __add__()
: Vec3
- __copy__()
: Force
- __deepcopy__()
: Force
, Vec3
- __del__()
: CheckpointReporter
, DCDReporter
, DesmondDMSFile
, PDBReporter
, StateDataReporter
, AmoebaAngleForce
, AmoebaBondForce
, AmoebaGeneralizedKirkwoodForce
, AmoebaInPlaneAngleForce
, AmoebaMultipoleForce
, AmoebaOutOfPlaneBendForce
, AmoebaPiTorsionForce
, AmoebaStretchBendForce
, AmoebaTorsionTorsionForce
, AmoebaVdwForce
, AmoebaWcaDispersionForce
, AndersenThermostat
, BrownianIntegrator
, CMAPTorsionForce
, CMMotionRemover
, Context
, Continuous1DFunction
, Continuous2DFunction
, Continuous3DFunction
, CustomAngleForce
, CustomBondForce
, CustomCompoundBondForce
, CustomExternalForce
, CustomGBForce
, CustomHbondForce
, CustomIntegrator
, CustomManyParticleForce
, CustomNonbondedForce
, CustomTorsionForce
, Discrete1DFunction
, Discrete2DFunction
, Discrete3DFunction
, DrudeForce
, DrudeLangevinIntegrator
, DrudeSCFIntegrator
, Force
, GBSAOBCForce
, GBVIForce
, HarmonicAngleForce
, HarmonicBondForce
, Integrator
, LangevinIntegrator
, LocalCoordinatesSite
, LocalEnergyMinimizer
, MonteCarloAnisotropicBarostat
, MonteCarloBarostat
, MonteCarloMembraneBarostat
, NonbondedForce
, OpenMMException
, OutOfPlaneSite
, PeriodicTorsionForce
, Platform
, RBTorsionForce
, RPMDIntegrator
, System
, TabulatedFunction
, ThreeParticleAverageSite
, TwoParticleAverageSite
, VariableLangevinIntegrator
, VariableVerletIntegrator
, VerletIntegrator
, VirtualSite
, XmlSerializer
- __div__()
: Vec3
- __getnewargs__()
: Vec3
- __getstate__()
: Integrator
, State
, System
- __init__()
: AmberInpcrdFile
, AmberPrmtopFile
, CharmmCrdFile
, CharmmRstFile
, CharmmParameterSet
, CharmmPsfFile
, CheckpointReporter
, DCDFile
, DCDReporter
, DesmondDMSFile
, Element
, ForceField
, GromacsGroFile
, GromacsTopFile
, Modeller
, PDBFile
, PDBReporter
, PDBxFile
, Simulation
, StateDataReporter
, Atom
, Chain
, Residue
, Topology
, AmoebaAngleForce
, AmoebaBondForce
, AmoebaGeneralizedKirkwoodForce
, AmoebaInPlaneAngleForce
, AmoebaMultipoleForce
, AmoebaOutOfPlaneBendForce
, AmoebaPiTorsionForce
, AmoebaStretchBendForce
, AmoebaTorsionTorsionForce
, AmoebaVdwForce
, AmoebaWcaDispersionForce
, AndersenThermostat
, BrownianIntegrator
, CMAPTorsionForce
, CMMotionRemover
, Context
, Continuous1DFunction
, Continuous2DFunction
, Continuous3DFunction
, CustomAngleForce
, CustomBondForce
, CustomCompoundBondForce
, CustomExternalForce
, CustomGBForce
, CustomHbondForce
, CustomIntegrator
, CustomManyParticleForce
, CustomNonbondedForce
, CustomTorsionForce
, Discrete1DFunction
, Discrete2DFunction
, Discrete3DFunction
, DrudeForce
, DrudeLangevinIntegrator
, DrudeSCFIntegrator
, Force
, GBSAOBCForce
, GBVIForce
, HarmonicAngleForce
, HarmonicBondForce
, Integrator
, LangevinIntegrator
, LocalCoordinatesSite
, LocalEnergyMinimizer
, MonteCarloAnisotropicBarostat
, MonteCarloBarostat
, MonteCarloMembraneBarostat
, NonbondedForce
, OpenMMException
, OutOfPlaneSite
, PeriodicTorsionForce
, Platform
, RBTorsionForce
, RPMDIntegrator
, State
, System
, TabulatedFunction
, ThreeParticleAverageSite
, TwoParticleAverageSite
, VariableLangevinIntegrator
, VariableVerletIntegrator
, VerletIntegrator
, VirtualSite
, XmlSerializer
- __mul__()
: Vec3
- __new__()
: Vec3
- __radd__()
: Vec3
- __repr__()
: GBn
, GBn2
, HCT
, OBC1
, OBC2
, Element
, AllBonds
, CutoffNonPeriodic
, CutoffPeriodic
, Ewald
, HAngles
, HBonds
, NoCutoff
, PME
- __rmul__()
: Vec3
- __rsub__()
: Vec3
- __setstate__()
: Integrator
, State
, System
- __str__()
: Element
- __sub__()
: Vec3